PO0004 Automated Peptide Desalting Using Dispersive Pipette Extraction Tips for Increased Protein Identifications
来源:IMCS
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作者:Sunil Hwang; Todd Mullis;Andrew Lee*
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发布时间: 2060天前
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2257 次浏览
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Desalting peptides is an essential procedure for improving LC-MS/MS analysis (1-3). Removing salts utilizes solid phase extraction
(SPE), which has relied on cartridge formats. Tese formats have been used for routine sample preparation and the microspin columnshave been developed to miniaturize and speed up the desalting processes. However, these procedures are not readily adapted forautomated liquid handlers. Here, we present automated, dispersive pipette extraction technology in IMCStips for robust and
high-throughput proteomics analysis. Several different resins were compared in spin column versus dispersive pipette (4). Specificpeptides were monitored for optimal loading and recoveries for both SPE formats (spin vs tip), and total proteome analysis wasassessed on cell lysates to determine total protein IDs for both extraction processes.
HEK293T cells were lysed with 8 M Urea, 75 mM NaCl, 50 mM NH4HCO3, 1 x protease and phosphatase inhibitor mixture. Tesamples were digested with trypsin (1:200, trypsin:lysate) overnight at 37 °C. For automatic sample processing, we developed a methodfor VIAFLO 96 from Integra and other high-throughput automatic liquid handling system (Figure 1, 2).
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