PO0005 Automated High-throughput Phosphopeptide Enrichment Using TiO2Dispersive Pipette Extraction
来源:IMCS
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作者:Sunil Hwang1, Todd Mullis1, Jingyun lee2, Cristina Furdui2, Andrew Lee1*
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发布时间: 2060天前
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2354 次浏览
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hosphorylation events are key signal transduction mechanisms within the eukaryotic cells and further understanding such signaling
pathways can elucidate crucial molecular signatures of various human diseases (1-3). Te global deep profiling of phosphospeptide has beensuccessfully optimized in the procedures of enrichment, mass spectrometry, and data analysis (4,5). However, phosphopeptide enrichment ishighly labor-intensive and a low-throughput process that leads to poor reproducibility (6-8). Here, we introduce a phosphopeptide enrichmentleveraging dispersive pipette extraction technology on IMCStips. In comparison to conventional solid phase extraction technologies, thepatented dispersive pipette extraction process uses loose resin that mixes during aspiration and dispense steps. Tis increases the interactionbetween the resin and sample via turbulent mixing within the pipette tips. Te tips containing titanium oxide (TiO2) resin were used toexplore the initial feasibility of DPX technology for phosphopeptide enrichment. Te reported method uses automated liquid handlingsystems, such as Integra ViaFlo96, to enrich phosphopeptides from cell lysates for high-throughput and reproducible sample preparation tostudy phosphorylation events.
HEK293T cells were treated with 5 mM H2O2for 15 minutes and washed three times with cold PBS. Te cells were lysed with 8 M Ureabuffer containing a protease and phosphatase inhibitor cocktail. 10 mM dithiothreitol was added to reduce at 56 °C for 30 minutes, then 25mM iodoacetamide was added for alkylation for 30 minutes in the dark followed by overnight tryptic digestion at 37 °C. For automaticsample processing, we developed a method for the VIAFLO96 from Integra and other high-throughput robotic system (Figure 1, 2).
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